Review Project

Project:	cell lines from 9 cancer tissues (NCI-60)
Species:	Human
Date:	2013-05-23
URL:	Mol Cancer Ther 2009
Notes:	Comparison between cell lines from 9 different cancer tissue of origin types (Breast, Central Nervous System, Colon, Leukemia, Melanoma, Non-Small Cell Lung, Ovarian, Prostateostate, Renal) from NCI-60 panel. http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE32474
Tags:	Cancer
Correlation Tags:

About The Data

Platform:	Human Genome U133 Plus 2.0 Array
Import Status:	Verified, Ready To Use
Import Status Details:	Good

No.	Original Name	Display Name	Type	Log Scale	Statistical Value Categories	Experiments
1.	ID_REF	Prostateobe Set	Identifier	Identifier	Identifier
2.	GSM803615	CCRF_CEM	Data	Log 2	Log 2	Leukemia
3.	GSM803616	HL_60	Data	Log 2	Log 2	Leukemia
4.	GSM803617	MOLT_4	Data	Log 2	Log 2	Leukemia
5.	GSM803618	RPMI_8226	Data	Log 2	Log 2	Leukemia
6.	GSM803619	SR	Data	Log 2	Log 2	Leukemia
7.	GSM803620	K_562	Data	Log 2	Log 2	Leukemia
8.	GSM803621	BT_549	Data	Log 2	Log 2	Breast
9.	GSM803622	HS578T	Data	Log 2	Log 2	Breast
10.	GSM803623	MCF7	Data	Log 2	Log 2	Breast
11.	GSM803624	NCI_ADR_RES	Data	Log 2	Log 2	Ovarian
12.	GSM803625	MDA_MB_231	Data	Log 2	Log 2	Breast
13.	GSM803626	MDA_MB_435	Data	Log 2	Log 2	Melanoma
14.	GSM803627	SF_268	Data	Log 2	Log 2	CNS
15.	GSM803628	SF_295	Data	Log 2	Log 2	CNS
16.	GSM803629	SF_539	Data	Log 2	Log 2	CNS
17.	GSM803630	SNB_19	Data	Log 2	Log 2	CNS
18.	GSM803631	SNB_75	Data	Log 2	Log 2	CNS
19.	GSM803632	U251	Data	Log 2	Log 2	CNS
20.	GSM803633	COLO205	Data	Log 2	Log 2	Colon
21.	GSM803634	HCC_2998	Data	Log 2	Log 2	Colon
22.	GSM803635	HCT_116	Data	Log 2	Log 2	Colon
23.	GSM803636	HCT_15	Data	Log 2	Log 2	Colon
24.	GSM803637	HT29	Data	Log 2	Log 2	Colon
25.	GSM803638	KM12	Data	Log 2	Log 2	Colon
26.	GSM803639	SW_620	Data	Log 2	Log 2	Colon
27.	GSM803640	786_0	Data	Log 2	Log 2	Renal
28.	GSM803641	A498	Data	Log 2	Log 2	Renal
29.	GSM803642	ACHN	Data	Log 2	Log 2	Renal
30.	GSM803643	CAKI_1	Data	Log 2	Log 2	Renal
31.	GSM803644	RXF_393	Data	Log 2	Log 2	Renal
32.	GSM803645	SN12C	Data	Log 2	Log 2	Renal
33.	GSM803646	TK_10	Data	Log 2	Log 2	Renal
34.	GSM803647	UO_31	Data	Log 2	Log 2	Renal
35.	GSM803648	A549	Data	Log 2	Log 2	Lung
36.	GSM803649	EKVX	Data	Log 2	Log 2	Lung
37.	GSM803650	HOP_62	Data	Log 2	Log 2	Lung
38.	GSM803651	HOP_92	Data	Log 2	Log 2	Lung
39.	GSM803652	NCI_H226	Data	Log 2	Log 2	Lung
40.	GSM803653	NCI_H23	Data	Log 2	Log 2	Lung
41.	GSM803654	NCI_H322M	Data	Log 2	Log 2	Lung
42.	GSM803655	NCI_H460	Data	Log 2	Log 2	Lung
43.	GSM803656	NCI_H522	Data	Log 2	Log 2	Lung
44.	GSM803657	IGROV1	Data	Log 2	Log 2	Ovarian
45.	GSM803658	OVCAR_3	Data	Log 2	Log 2	Ovarian
46.	GSM803659	OVCAR_4	Data	Log 2	Log 2	Ovarian
47.	GSM803660	OVCAR_5	Data	Log 2	Log 2	Ovarian
48.	GSM803661	OVCAR_8	Data	Log 2	Log 2	Ovarian
49.	GSM803662	SK_OV_3	Data	Log 2	Log 2	Ovarian
50.	GSM803663	DU_145(DTP)	Data	Log 2	Log 2	Prostate
51.	GSM803664	PC_3	Data	Log 2	Log 2	Prostate
52.	GSM803665	LOXIMVI	Data	Log 2	Log 2	Melanoma
53.	GSM803666	M14	Data	Log 2	Log 2	Melanoma
54.	GSM803667	MALME_3M	Data	Log 2	Log 2	Melanoma
55.	GSM803668	SK_MEL_2	Data	Log 2	Log 2	Melanoma
56.	GSM803669	SK_MEL_28	Data	Log 2	Log 2	Melanoma
57.	GSM803670	SK_MEL_5	Data	Log 2	Log 2	Melanoma
58.	GSM803671	UACC_257	Data	Log 2	Log 2	Melanoma
59.	GSM803672	UACC_62	Data	Log 2	Log 2	Melanoma
60.	GSM803673	T47D	Data	Log 2	Log 2	Breast
61.	GSM803674	CCRF_CEM	Data	Log 2	Log 2	Leukemia
62.	GSM803675	HL_60	Data	Log 2	Log 2	Leukemia
63.	GSM803676	MOLT_4	Data	Log 2	Log 2	Leukemia
64.	GSM803677	RPMI_8226	Data	Log 2	Log 2	Leukemia
65.	GSM803678	SR	Data	Log 2	Log 2	Leukemia
66.	GSM803679	K_562	Data	Log 2	Log 2	Leukemia
67.	GSM803680	BT_549	Data	Log 2	Log 2	Breast
68.	GSM803681	HS578T	Data	Log 2	Log 2	Breast
69.	GSM803682	MCF7	Data	Log 2	Log 2	Breast
70.	GSM803683	NCI_ADR_RES	Data	Log 2	Log 2	Ovarian
71.	GSM803684	MDA_MB_231	Data	Log 2	Log 2	Breast
72.	GSM803685	MDA_MB_435	Data	Log 2	Log 2	Melanoma
73.	GSM803686	SF_268	Data	Log 2	Log 2	CNS
74.	GSM803687	SF_295	Data	Log 2	Log 2	CNS
75.	GSM803688	SF_539	Data	Log 2	Log 2	CNS
76.	GSM803689	SNB_19	Data	Log 2	Log 2	CNS
77.	GSM803690	SNB_75	Data	Log 2	Log 2	CNS
78.	GSM803691	U251	Data	Log 2	Log 2	CNS
79.	GSM803692	COLO205	Data	Log 2	Log 2	Colon
80.	GSM803693	HCC_2998	Data	Log 2	Log 2	Colon
81.	GSM803694	HCT_116	Data	Log 2	Log 2	Colon
82.	GSM803695	HCT_15	Data	Log 2	Log 2	Colon
83.	GSM803696	HT29	Data	Log 2	Log 2	Colon
84.	GSM803697	KM12	Data	Log 2	Log 2	Colon
85.	GSM803698	SW_620	Data	Log 2	Log 2	Colon
86.	GSM803699	786_0	Data	Log 2	Log 2	Renal
87.	GSM803700	A498	Data	Log 2	Log 2	Renal
88.	GSM803701	ACHN	Data	Log 2	Log 2	Renal
89.	GSM803702	CAKI_1	Data	Log 2	Log 2	Renal
90.	GSM803703	RXF_393	Data	Log 2	Log 2	Renal
91.	GSM803704	SN12C	Data	Log 2	Log 2	Renal
92.	GSM803705	TK_10	Data	Log 2	Log 2	Renal
93.	GSM803706	UO_31	Data	Log 2	Log 2	Renal
94.	GSM803707	A549	Data	Log 2	Log 2	Lung
95.	GSM803708	EKVX	Data	Log 2	Log 2	Lung
96.	GSM803709	HOP_62	Data	Log 2	Log 2	Lung
97.	GSM803710	HOP_92	Data	Log 2	Log 2	Lung
98.	GSM803711	NCI_H226	Data	Log 2	Log 2	Lung
99.	GSM803712	NCI_H23	Data	Log 2	Log 2	Lung
100.	GSM803713	NCI_H322M	Data	Log 2	Log 2	Lung
101.	GSM803714	NCI_H460	Data	Log 2	Log 2	Lung
102.	GSM803715	NCI_H522	Data	Log 2	Log 2	Lung
103.	GSM803716	IGROV1	Data	Log 2	Log 2	Ovarian
104.	GSM803717	OVCAR_3	Data	Log 2	Log 2	Ovarian
105.	GSM803718	OVCAR_4	Data	Log 2	Log 2	Ovarian
106.	GSM803719	OVCAR_5	Data	Log 2	Log 2	Ovarian
107.	GSM803720	OVCAR_8	Data	Log 2	Log 2	Ovarian
108.	GSM803721	DU_145(DTP)	Data	Log 2	Log 2	Prostate
109.	GSM803722	PC_3	Data	Log 2	Log 2	Prostate
110.	GSM803723	LOXIMVI	Data	Log 2	Log 2	Melanoma
111.	GSM803724	M14	Data	Log 2	Log 2	Melanoma
112.	GSM803725	MALME_3M	Data	Log 2	Log 2	Melanoma
113.	GSM803726	SK_MEL_2	Data	Log 2	Log 2	Melanoma
114.	GSM803727	SK_MEL_28	Data	Log 2	Log 2	Melanoma
115.	GSM803728	SK_MEL_5	Data	Log 2	Log 2	Melanoma
116.	GSM803729	UACC_257	Data	Log 2	Log 2	Melanoma
117.	GSM803730	UACC_62	Data	Log 2	Log 2	Melanoma
118.	GSM803731	T47D	Data	Log 2	Log 2	Breast
119.	GSM803732	SK_OV_3	Data	Log 2	Log 2	Ovarian
120.	GSM803733	CCRF_CEM	Data	Log 2	Log 2	Leukemia
121.	GSM803734	HL_60	Data	Log 2	Log 2	Leukemia
122.	GSM803735	MOLT_4	Data	Log 2	Log 2	Leukemia
123.	GSM803736	RPMI_8226	Data	Log 2	Log 2	Leukemia
124.	GSM803737	SR	Data	Log 2	Log 2	Leukemia
125.	GSM803738	K_562	Data	Log 2	Log 2	Leukemia
126.	GSM803739	BT_549	Data	Log 2	Log 2	Breast
127.	GSM803740	HS578T	Data	Log 2	Log 2	Breast
128.	GSM803741	MCF7	Data	Log 2	Log 2	Breast
129.	GSM803742	NCI_ADR_RES	Data	Log 2	Log 2	Ovarian
130.	GSM803743	MDA_MB_231	Data	Log 2	Log 2	Breast
131.	GSM803744	MDA_MB_435	Data	Log 2	Log 2	Melanoma
132.	GSM803745	SF_268	Data	Log 2	Log 2	CNS
133.	GSM803746	SF_295	Data	Log 2	Log 2	CNS
134.	GSM803747	SF_539	Data	Log 2	Log 2	CNS
135.	GSM803748	SNB_19	Data	Log 2	Log 2	CNS
136.	GSM803749	SNB_75	Data	Log 2	Log 2	CNS
137.	GSM803750	U251	Data	Log 2	Log 2	CNS
138.	GSM803751	COLO205	Data	Log 2	Log 2	Colon
139.	GSM803752	HCC_2998	Data	Log 2	Log 2	Colon
140.	GSM803753	HCT_116	Data	Log 2	Log 2	Colon
141.	GSM803754	HCT_15	Data	Log 2	Log 2	Colon
142.	GSM803755	HT29	Data	Log 2	Log 2	Colon
143.	GSM803756	KM12	Data	Log 2	Log 2	Colon
144.	GSM803757	SW_620	Data	Log 2	Log 2	Colon
145.	GSM803758	786_0	Data	Log 2	Log 2	Renal
146.	GSM803759	A498	Data	Log 2	Log 2	Renal
147.	GSM803760	ACHN	Data	Log 2	Log 2	Renal
148.	GSM803761	RXF_393	Data	Log 2	Log 2	Renal
149.	GSM803762	SN12C	Data	Log 2	Log 2	Renal
150.	GSM803763	TK_10	Data	Log 2	Log 2	Renal
151.	GSM803764	UO_31	Data	Log 2	Log 2	Renal
152.	GSM803765	A549	Data	Log 2	Log 2	Lung
153.	GSM803766	EKVX	Data	Log 2	Log 2	Lung
154.	GSM803767	HOP_62	Data	Log 2	Log 2	Lung
155.	GSM803768	HOP_92	Data	Log 2	Log 2	Lung
156.	GSM803769	NCI_H23	Data	Log 2	Log 2	Lung
157.	GSM803770	NCI_H322M	Data	Log 2	Log 2	Lung
158.	GSM803771	NCI_H460	Data	Log 2	Log 2	Lung
159.	GSM803772	NCI_H522	Data	Log 2	Log 2	Lung
160.	GSM803773	IGROV1	Data	Log 2	Log 2	Ovarian
161.	GSM803774	OVCAR_3	Data	Log 2	Log 2	Ovarian
162.	GSM803775	OVCAR_4	Data	Log 2	Log 2	Ovarian
163.	GSM803776	OVCAR_5	Data	Log 2	Log 2	Ovarian
164.	GSM803777	OVCAR_8	Data	Log 2	Log 2	Ovarian
165.	GSM803778	SK_OV_3	Data	Log 2	Log 2	Ovarian
166.	GSM803779	DU_145(DTP)	Data	Log 2	Log 2	Prostate
167.	GSM803780	PC_3	Data	Log 2	Log 2	Prostate
168.	GSM803781	LOXIMVI	Data	Log 2	Log 2	Melanoma
169.	GSM803782	M14	Data	Log 2	Log 2	Melanoma
170.	GSM803783	MALME_3M	Data	Log 2	Log 2	Melanoma
171.	GSM803784	SK_MEL_2	Data	Log 2	Log 2	Melanoma
172.	GSM803785	SK_MEL_5	Data	Log 2	Log 2	Melanoma
173.	GSM803786	UACC_257	Data	Log 2	Log 2	Melanoma
174.	GSM803787	UACC_62	Data	Log 2	Log 2	Melanoma
175.	GSM803788	T47D	Data	Log 2	Log 2	Breast

» View Details

Platform:	Human Genome U133 Plus 2.0 Array
Type:	Expression Array
Manufacturer:	Affymetrix
Species:	Human
Build Version:	hg19
Release Date:
URL:	URL
Description:	All probe sets represented on the GeneChip Human Genome U133 Set are identically replicated on the GeneChip Human Genome U133 Plus 2.0 Array. The sequences from which these probe sets were derived were selected from GenBankÂ®, dbEST, and RefSeq. The sequence clusters were created from the UniGene database (Build 133, April 20, 2001) and then refined by analysis and comparison with a number of other publicly available databases, including the Washington University EST trace repository and the University of California, Santa Cruz Golden-Path human genome database (April 2001 release). In addition, there are 9,921 new probe sets representing approximately 6,500 new genes. These gene sequences were selected from GenBank, dbEST, and RefSeq. Sequence clusters were created from the UniGene database (Build 159, January 25, 2003) and refined by analysis and comparison with a number of other publicly available databases, including the Washington University EST trace repository and the NCBI human genome assembly (Build 31).
Notes:
Annotation File Status:	Verified, Ready To Use
Import Status:	Good

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No.	Labels	Files	Date/Time	Size
1.	Datasheet	hgu133arrays_datasheet.pdf	2013-04-09 13:45:55	1.77 MB

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