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Platform:Human Genome U133 Plus 2.0 Array
Type:Expression Array
Manufacturer:Affymetrix
Species:Human
Build Version:hg19
Release Date:
URL:URL
Description:All probe sets represented on the GeneChip Human Genome U133 Set are identically replicated on the GeneChip Human Genome U133 Plus 2.0 Array. The sequences from which these probe sets were derived were selected from GenBank®, dbEST, and RefSeq. The sequence clusters were created from the UniGene database (Build 133, April 20, 2001) and then refined by analysis and comparison with a number of other publicly available databases, including the Washington University EST trace repository and the University of California, Santa Cruz Golden-Path human genome database (April 2001 release).

In addition, there are 9,921 new probe sets representing approximately 6,500 new genes. These gene sequences were selected from GenBank, dbEST, and RefSeq. Sequence clusters were created from the UniGene database (Build 159, January 25, 2003) and refined by analysis and comparison with a number of other publicly available databases, including the Washington University EST trace repository and the NCBI human genome assembly (Build 31).
Notes:
Annotation File Status:Verified, Ready To Use
Import Status:Good

Attached Files

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No.LabelsFilesDate/TimeSize
1.Datasheet hgu133arrays_datasheet.pdf2013-04-09 13:45:551.77 MB

Priority columns are the columns you search more often, e.g., gene symbol, RefSeq ID etc.

Original Name Display Name Additional Info
Probe Set ID Probe Set ID
UniGene ID UniGene ID UniGene
Gene Title Gene Title Description
Gene Symbol Gene Symbol Gene Symbol
Ensembl Ensembl Ensembl ID
Entrez Gene Entrez Gene Gene/Entrez/Locus ID
SwissProt SwissProt UniProt ID
RefSeq Transcript ID RefSeq Transcript ID RefSeq ID

Standard columns are the columns you search less often, e.g., Affymetrix ID

Original Name Display Name Additional Info
GeneChip Array GeneChip Array
Species Scientific Name Species Scientific Name
Annotation Date Annotation Date
Sequence Type Sequence Type
Sequence Source Sequence Source
Transcript ID(Array Design) Transcript ID(Array Design)
Target Description Target Description
Representative Public ID Representative Public ID
Archival UniGene Cluster Archival UniGene Cluster
Genome Version Genome Version
Alignments Alignments
Chromosomal Location Chromosomal Location
Unigene Cluster Type Unigene Cluster Type
EC EC
OMIM OMIM
RefSeq Protein ID RefSeq Protein ID
FlyBase FlyBase
AGI AGI
WormBase WormBase
MGI Name MGI Name
RGD Name RGD Name
SGD accession number SGD accession number
Gene Ontology Biological Process Gene Ontology Biological Process
Gene Ontology Cellular Component Gene Ontology Cellular Component
Gene Ontology Molecular Function Gene Ontology Molecular Function
Pathway Pathway
InterPro InterPro
Trans Membrane Trans Membrane
QTL QTL
Annotation Description Annotation Description
Annotation Transcript Cluster Annotation Transcript Cluster
Transcript Assignments Transcript Assignments
Annotation Notes Annotation Notes
No.ProjectNotesURLSpeciesTags
1.hES and hiPS Expression Global gene expression data for ...Cell Stem Cell 2010HumanES Cell
2.cell lines from 9 cancer tissues (NCI-60) Comparison between cell lines from 9 different cancer tissue of origin types (Breast, Central Nervous System, Colon, Leukemia, Melanoma, Non-Small Cell Lung, Ovarian, Prostateostate, Renal) from NCI-60 panel.
http://www.ncbi.nlm....
Mol Cancer Ther 2009HumanCancer