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1429388_at / Nanog

Project: Mouse Gene Atlas • Platform: Mouse Genome 430 2.0

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Experiments: adipose
Avg. Experiments: adipose
• adipose_brown_1
• adipose_brown_2
• adipose_white_1
• adipose_white_2
Experiments: bone
Avg. Experiments: bone
• bone_1
• bone_2
• bone_marrow_1
• bone_marrow_2
Experiments: Cell Line
Avg. Experiments: Cell Line
• 3T3-L1_1
• 3T3-L1_2
• C2C12_1
• C2C12_2
• C3H_10T1_2_1
• C3H_10T1_2_2
• MEF
• mIMCD-3_1
• mIMCD-3_2
• min6_1
• min6_2
• nih_3T3_1
• nih_3T3_2
Experiments: ES
Avg. Experiments: ES
• embryonic_stem_line_Bruce4_p13_1
• embryonic_stem_line_Bruce4_p13_2
• embryonic_stem_line_V26_2_p16_1
• embryonic_stem_line_V26_2_p16_2
Experiments: heart
Avg. Experiments: heart
• heart_1
• heart_2
Experiments: HSC
Avg. Experiments: HSC
• stem_cells__HSC_1
• stem_cells__HSC_2
Experiments: Immu_Cell
Avg. Experiments: Immu_Cell
• B-cells_GL7_negative_KLH_1
• B-cells_GL7_negative_KLH_2
• B-cells_GL7_positive_Alum_1
• B-cells_GL7_positive_Alum_2
• B-cells_GL7_positive_KLH_1
• B-cells_GL7_positive_KLH_2
• B-cells_GL7_negative_Alum_1
• B-cells_GL7_negative_Alum_2
• B-cells_marginal_zone_1
• B-cells_marginal_zone_2
• Baf3_1
• Baf3_2
• NK_cells_1
• NK_cells_2
• RAW_264_7_1
• RAW_264_7_2
• T-cells_CD4+_1
• T-cells_CD4+_2
• T-cells_CD8+_1
• T-cells_CD8+_2
• T-cells_foxP3+_1
• T-cells_foxP3+_2
• dendritic_cells_lymphoid_CD8a+_1
• dendritic_cells_lymphoid_CD8a+_2
• dendritic_cells_myeloid_CD8a-_1
• dendritic_cells_myeloid_CD8a-_2
• dendritic_plasmacytoid_B220+_1
• dendritic_plasmacytoid_B220+_2
• lymph_nodes_1
• lymph_nodes_2
• macrophage_bone_marrow_0hr_1
• macrophage_bone_marrow_0hr_2
• macrophage_bone_marrow_24h_LPS_1
• macrophage_bone_marrow_24h_LPS_2
• macrophage_bone_marrow_2hr_LPS_1
• macrophage_bone_marrow_2hr_LPS_2
• macrophage_bone_marrow_6hr_LPS_1
• macrophage_bone_marrow_6hr_LPS_2
• macrophage_peri_LPS_thio_0hrs_1
• macrophage_peri_LPS_thio_0hrs_2
• macrophage_peri_LPS_thio_1hrs_1
• macrophage_peri_LPS_thio_1hrs_2
• macrophage_peri_LPS_thio_7hrs_1
• macrophage_peri_LPS_thio_7hrs_2
• mast_cells_1
• mast_cells_2
• mast_cells_IgE_1
• mast_cells_IgE_2
• mast_cells_IgE+antigen_1hr_1
• mast_cells_IgE+antigen_1hr_2
• mast_cells_IgE+antigen_6hr_1
• mast_cells_IgE+antigen_6hr_2
• thymocyte_DP_CD4+CD8+_1
• thymocyte_DP_CD4+CD8+_2
• thymocyte_SP_CD4+_1
• thymocyte_SP_CD4+_2
• thymocyte_SP_CD8+_1
• thymocyte_SP_CD8+_2
Experiments: intestine
Avg. Experiments: intestine
• intestine_large_1
• intestine_large_2
• intestine_small_1
• intestine_small_2
Experiments: kidney
Avg. Experiments: kidney
• kidney_1
• kidney_2
Experiments: liver
Avg. Experiments: liver
• liver_1
• liver_2
Experiments: lung
Avg. Experiments: lung
• lung_1
• lung_2
Experiments: muscle
Avg. Experiments: muscle
• skeletal_muscle_1
• skeletal_muscle_2
• stomach_1
• stomach_2
Experiments: Neuro_Cells
Avg. Experiments: Neuro_Cells
• amygdala_1
• amygdala_2
• cerebellum_1
• cerebellum_2
• cerebral_cortex_1
• cerebral_cortex_2
• cerebral_cortex_prefrontal_1
• cerebral_cortex_prefrontal_2
• dorsal_root_ganglia_1
• dorsal_root_ganglia_2
• dorsal_striatum_1
• dorsal_striatum_2
• hippocampus_1
• hippocampus_2
• hypothalamus_1
• hypothalamus_2
• microglia_1
• microglia_2
• neuro2a_1
• neuro2a_2
• nucleus_accumbens_1
• nucleus_accumbens_2
• olfactory_bulb_1
• olfactory_bulb_2
Experiments: pancreas
Avg. Experiments: pancreas
• pancreas_1
• pancreas_2
Experiments: spleen
Avg. Experiments: spleen
• spleen_1
• spleen_2
Experiments: testis
Avg. Experiments: testis
• testis_1
• testis_2
Experiments: Tissue_oth
Avg. Experiments: Tissue_oth
• adrenal_gland_1
• adrenal_gland_2
• bladder_1
• bladder_2
• ciliary_bodies_1
• ciliary_bodies_2
• common_myeloid_progenitor_1
• common_myeloid_progenitor_2
• cornea_1
• cornea_2
• epidermis_1
• epidermis_2
• eyecup_1
• eyecup_2
• follicular_B-cells_1
• follicular_B-cells_2
• granulo_mono_progenitor_1
• granulo_mono_progenitor_2
• granulocytes_mac1+gr1+_1
• granulocytes_mac1+gr1+_2
• iris_1
• iris_2
• lacrimal_gland_1
• lacrimal_gland_2
• lens_1
• lens_2
• mammary_gland__lact_1
• mammary_gland__lact_2
• mammary_gland_non-lactating_1
• mammary_gland_non-lactating_2
• mega_erythrocyte_progenitor_1
• mega_erythrocyte_progenitor_2
• osteoblast_day14_1
• osteoblast_day14_2
• osteoblast_day21_1
• osteoblast_day21_2
• osteoblast_day5_1
• osteoblast_day5_2
• osteoclasts_1
• osteoclasts_2
• ovary_1
• ovary_2
• pituitary_1
• pituitary_2
• placenta_1
• placenta_2
• prostate_1
• prostate_2
• retina_1
• retina_2
• retinal_pigment_epithelium_1
• retinal_pigment_epithelium_2
• salivary_gland_1
• salivary_gland_2
• spinal_cord_1
• spinal_cord_2
• umbilical_cord_1
• umbilical_cord_2
• uterus_1
• uterus_2

Selected Samples: 191 out of 191

Data

No.Original NameData ValueDisplay NameTypeLog ScaleStatistical Value
Categories
Experiments
1.ProbeSet1429388_atProbeSetIdentifier
2.3T3-L1_153T3-L1_1DataLinearCell Line
3.3T3-L1_253T3-L1_2DataLinearCell Line
4.B-cells_GL7_negative_KLH_15B-cells_GL7_negative_KLH_1DataLinearImmu_Cell
5.B-cells_GL7_negative_KLH_25B-cells_GL7_negative_KLH_2DataLinearImmu_Cell
6.B-cells_GL7_positive_Alum_15B-cells_GL7_positive_Alum_1DataLinearImmu_Cell
7.B-cells_GL7_positive_Alum_25B-cells_GL7_positive_Alum_2DataLinearImmu_Cell
8.B-cells_GL7_positive_KLH_15B-cells_GL7_positive_KLH_1DataLinearImmu_Cell
9.B-cells_GL7_positive_KLH_25B-cells_GL7_positive_KLH_2DataLinearImmu_Cell
10.B-cells_GL7_negative_Alum_15B-cells_GL7_negative_Alum_1DataLinearImmu_Cell
11.B-cells_GL7_negative_Alum_25B-cells_GL7_negative_Alum_2DataLinearImmu_Cell
12.B-cells_marginal_zone_15B-cells_marginal_zone_1DataLinearImmu_Cell
13.B-cells_marginal_zone_25B-cells_marginal_zone_2DataLinearImmu_Cell
14.Baf3_15Baf3_1DataLinearImmu_Cell
15.Baf3_25Baf3_2DataLinearImmu_Cell
16.C2C12_15C2C12_1DataLinearCell Line
17.C2C12_25C2C12_2DataLinearCell Line
18.C3H_10T1_2_15C3H_10T1_2_1DataLinearCell Line
19.C3H_10T1_2_25C3H_10T1_2_2DataLinearCell Line
20.MEF5MEFDataLinearCell Line
21.NK_cells_15NK_cells_1DataLinearImmu_Cell
22.NK_cells_25NK_cells_2DataLinearImmu_Cell
23.RAW_264_7_15RAW_264_7_1DataLinearImmu_Cell
24.RAW_264_7_25RAW_264_7_2DataLinearImmu_Cell
25.T-cells_CD4+_15T-cells_CD4+_1DataLinearImmu_Cell
26.T-cells_CD4+_25T-cells_CD4+_2DataLinearImmu_Cell
27.T-cells_CD8+_15T-cells_CD8+_1DataLinearImmu_Cell
28.T-cells_CD8+_25T-cells_CD8+_2DataLinearImmu_Cell
29.T-cells_foxP3+_15T-cells_foxP3+_1DataLinearImmu_Cell
30.T-cells_foxP3+_25T-cells_foxP3+_2DataLinearImmu_Cell
31.adipose_brown_15adipose_brown_1DataLinearadipose
32.adipose_brown_25adipose_brown_2DataLinearadipose
33.adipose_white_15adipose_white_1DataLinearadipose
34.adipose_white_25adipose_white_2DataLinearadipose
35.adrenal_gland_15adrenal_gland_1DataLinearTissue_oth
36.adrenal_gland_25adrenal_gland_2DataLinearTissue_oth
37.amygdala_15amygdala_1DataLinearNeuro_Cells
38.amygdala_25amygdala_2DataLinearNeuro_Cells
39.bladder_15bladder_1DataLinearTissue_oth
40.bladder_25bladder_2DataLinearTissue_oth
41.bone_15bone_1DataLinearbone
42.bone_25bone_2DataLinearbone
43.bone_marrow_15bone_marrow_1DataLinearbone
44.bone_marrow_25bone_marrow_2DataLinearbone
45.cerebellum_15cerebellum_1DataLinearNeuro_Cells
46.cerebellum_25cerebellum_2DataLinearNeuro_Cells
47.cerebral_cortex_15cerebral_cortex_1DataLinearNeuro_Cells
48.cerebral_cortex_25cerebral_cortex_2DataLinearNeuro_Cells
49.cerebral_cortex_prefrontal_15cerebral_cortex_prefrontal_1DataLinearNeuro_Cells
50.cerebral_cortex_prefrontal_25cerebral_cortex_prefrontal_2DataLinearNeuro_Cells
51.ciliary_bodies_15ciliary_bodies_1DataLinearTissue_oth
52.ciliary_bodies_25ciliary_bodies_2DataLinearTissue_oth
53.common_myeloid_progenitor_15common_myeloid_progenitor_1DataLinearTissue_oth
54.common_myeloid_progenitor_25common_myeloid_progenitor_2DataLinearTissue_oth
55.cornea_15cornea_1DataLinearTissue_oth
56.cornea_25cornea_2DataLinearTissue_oth
57.dendritic_cells_lymphoid_CD8a+_15dendritic_cells_lymphoid_CD8a+_1DataLinearImmu_Cell
58.dendritic_cells_lymphoid_CD8a+_25dendritic_cells_lymphoid_CD8a+_2DataLinearImmu_Cell
59.dendritic_cells_myeloid_CD8a-_15dendritic_cells_myeloid_CD8a-_1DataLinearImmu_Cell
60.dendritic_cells_myeloid_CD8a-_25dendritic_cells_myeloid_CD8a-_2DataLinearImmu_Cell
61.dendritic_plasmacytoid_B220+_15dendritic_plasmacytoid_B220+_1DataLinearImmu_Cell
62.dendritic_plasmacytoid_B220+_25dendritic_plasmacytoid_B220+_2DataLinearImmu_Cell
63.dorsal_root_ganglia_15dorsal_root_ganglia_1DataLinearNeuro_Cells
64.dorsal_root_ganglia_25dorsal_root_ganglia_2DataLinearNeuro_Cells
65.dorsal_striatum_15dorsal_striatum_1DataLinearNeuro_Cells
66.dorsal_striatum_25dorsal_striatum_2DataLinearNeuro_Cells
67.embryonic_stem_line_Bruce4_p13_17,689embryonic_stem_line_Bruce4_p13_1DataLinearES
68.embryonic_stem_line_Bruce4_p13_27,271embryonic_stem_line_Bruce4_p13_2DataLinearES
69.embryonic_stem_line_V26_2_p16_14,117embryonic_stem_line_V26_2_p16_1DataLinearES
70.embryonic_stem_line_V26_2_p16_25,145embryonic_stem_line_V26_2_p16_2DataLinearES
71.epidermis_15epidermis_1DataLinearTissue_oth
72.epidermis_25epidermis_2DataLinearTissue_oth
73.eyecup_110eyecup_1DataLinearTissue_oth
74.eyecup_25eyecup_2DataLinearTissue_oth
75.follicular_B-cells_15follicular_B-cells_1DataLinearTissue_oth
76.follicular_B-cells_25follicular_B-cells_2DataLinearTissue_oth
77.granulo_mono_progenitor_15granulo_mono_progenitor_1DataLinearTissue_oth
78.granulo_mono_progenitor_25granulo_mono_progenitor_2DataLinearTissue_oth
79.granulocytes_mac1+gr1+_16granulocytes_mac1+gr1+_1DataLinearTissue_oth
80.granulocytes_mac1+gr1+_25granulocytes_mac1+gr1+_2DataLinearTissue_oth
81.heart_15heart_1DataLinearheart
82.heart_25heart_2DataLinearheart
83.hippocampus_15hippocampus_1DataLinearNeuro_Cells
84.hippocampus_25hippocampus_2DataLinearNeuro_Cells
85.hypothalamus_15hypothalamus_1DataLinearNeuro_Cells
86.hypothalamus_25hypothalamus_2DataLinearNeuro_Cells
87.intestine_large_15intestine_large_1DataLinearintestine
88.intestine_large_25intestine_large_2DataLinearintestine
89.intestine_small_15intestine_small_1DataLinearintestine
90.intestine_small_25intestine_small_2DataLinearintestine
91.iris_15iris_1DataLinearTissue_oth
92.iris_25iris_2DataLinearTissue_oth
93.kidney_15kidney_1DataLinearkidney
94.kidney_25kidney_2DataLinearkidney
95.lacrimal_gland_15lacrimal_gland_1DataLinearTissue_oth
96.lacrimal_gland_25lacrimal_gland_2DataLinearTissue_oth
97.lens_15lens_1DataLinearTissue_oth
98.lens_25lens_2DataLinearTissue_oth
99.liver_17liver_1DataLinearliver
100.liver_25liver_2DataLinearliver
101.lung_15lung_1DataLinearlung
102.lung_25lung_2DataLinearlung
103.lymph_nodes_15lymph_nodes_1DataLinearImmu_Cell
104.lymph_nodes_25lymph_nodes_2DataLinearImmu_Cell
105.mIMCD-3_15mIMCD-3_1DataLinearCell Line
106.mIMCD-3_25mIMCD-3_2DataLinearCell Line
107.macrophage_bone_marrow_0hr_15macrophage_bone_marrow_0hr_1DataLinearImmu_Cell
108.macrophage_bone_marrow_0hr_25macrophage_bone_marrow_0hr_2DataLinearImmu_Cell
109.macrophage_bone_marrow_24h_LPS_15macrophage_bone_marrow_24h_LPS_1DataLinearImmu_Cell
110.macrophage_bone_marrow_24h_LPS_26macrophage_bone_marrow_24h_LPS_2DataLinearImmu_Cell
111.macrophage_bone_marrow_2hr_LPS_15macrophage_bone_marrow_2hr_LPS_1DataLinearImmu_Cell
112.macrophage_bone_marrow_2hr_LPS_25macrophage_bone_marrow_2hr_LPS_2DataLinearImmu_Cell
113.macrophage_bone_marrow_6hr_LPS_15macrophage_bone_marrow_6hr_LPS_1DataLinearImmu_Cell
114.macrophage_bone_marrow_6hr_LPS_25macrophage_bone_marrow_6hr_LPS_2DataLinearImmu_Cell
115.macrophage_peri_LPS_thio_0hrs_15macrophage_peri_LPS_thio_0hrs_1DataLinearImmu_Cell
116.macrophage_peri_LPS_thio_0hrs_25macrophage_peri_LPS_thio_0hrs_2DataLinearImmu_Cell
117.macrophage_peri_LPS_thio_1hrs_15macrophage_peri_LPS_thio_1hrs_1DataLinearImmu_Cell
118.macrophage_peri_LPS_thio_1hrs_25macrophage_peri_LPS_thio_1hrs_2DataLinearImmu_Cell
119.macrophage_peri_LPS_thio_7hrs_15macrophage_peri_LPS_thio_7hrs_1DataLinearImmu_Cell
120.macrophage_peri_LPS_thio_7hrs_25macrophage_peri_LPS_thio_7hrs_2DataLinearImmu_Cell
121.mammary_gland__lact_15mammary_gland__lact_1DataLinearTissue_oth
122.mammary_gland__lact_25mammary_gland__lact_2DataLinearTissue_oth
123.mammary_gland_non-lactating_15mammary_gland_non-lactating_1DataLinearTissue_oth
124.mammary_gland_non-lactating_26mammary_gland_non-lactating_2DataLinearTissue_oth
125.mast_cells_15mast_cells_1DataLinearImmu_Cell
126.mast_cells_25mast_cells_2DataLinearImmu_Cell
127.mast_cells_IgE_15mast_cells_IgE_1DataLinearImmu_Cell
128.mast_cells_IgE_25mast_cells_IgE_2DataLinearImmu_Cell
129.mast_cells_IgE+antigen_1hr_15mast_cells_IgE+antigen_1hr_1DataLinearImmu_Cell
130.mast_cells_IgE+antigen_1hr_25mast_cells_IgE+antigen_1hr_2DataLinearImmu_Cell
131.mast_cells_IgE+antigen_6hr_15mast_cells_IgE+antigen_6hr_1DataLinearImmu_Cell
132.mast_cells_IgE+antigen_6hr_25mast_cells_IgE+antigen_6hr_2DataLinearImmu_Cell
133.mega_erythrocyte_progenitor_15mega_erythrocyte_progenitor_1DataLinearTissue_oth
134.mega_erythrocyte_progenitor_25mega_erythrocyte_progenitor_2DataLinearTissue_oth
135.microglia_15microglia_1DataLinearNeuro_Cells
136.microglia_27microglia_2DataLinearNeuro_Cells
137.min6_16min6_1DataLinearCell Line
138.min6_25min6_2DataLinearCell Line
139.neuro2a_119neuro2a_1DataLinearNeuro_Cells
140.neuro2a_25neuro2a_2DataLinearNeuro_Cells
141.nih_3T3_15nih_3T3_1DataLinearCell Line
142.nih_3T3_25nih_3T3_2DataLinearCell Line
143.nucleus_accumbens_15nucleus_accumbens_1DataLinearNeuro_Cells
144.nucleus_accumbens_25nucleus_accumbens_2DataLinearNeuro_Cells
145.olfactory_bulb_15olfactory_bulb_1DataLinearNeuro_Cells
146.olfactory_bulb_25olfactory_bulb_2DataLinearNeuro_Cells
147.osteoblast_day14_15osteoblast_day14_1DataLinearTissue_oth
148.osteoblast_day14_25osteoblast_day14_2DataLinearTissue_oth
149.osteoblast_day21_15osteoblast_day21_1DataLinearTissue_oth
150.osteoblast_day21_25osteoblast_day21_2DataLinearTissue_oth
151.osteoblast_day5_15osteoblast_day5_1DataLinearTissue_oth
152.osteoblast_day5_25osteoblast_day5_2DataLinearTissue_oth
153.osteoclasts_15osteoclasts_1DataLinearTissue_oth
154.osteoclasts_25osteoclasts_2DataLinearTissue_oth
155.ovary_15ovary_1DataLinearTissue_oth
156.ovary_25ovary_2DataLinearTissue_oth
157.pancreas_15pancreas_1DataLinearpancreas
158.pancreas_25pancreas_2DataLinearpancreas
159.pituitary_15pituitary_1DataLinearTissue_oth
160.pituitary_25pituitary_2DataLinearTissue_oth
161.placenta_15placenta_1DataLinearTissue_oth
162.placenta_25placenta_2DataLinearTissue_oth
163.prostate_15prostate_1DataLinearTissue_oth
164.prostate_25prostate_2DataLinearTissue_oth
165.retina_15retina_1DataLinearTissue_oth
166.retina_25retina_2DataLinearTissue_oth
167.retinal_pigment_epithelium_15retinal_pigment_epithelium_1DataLinearTissue_oth
168.retinal_pigment_epithelium_25retinal_pigment_epithelium_2DataLinearTissue_oth
169.salivary_gland_15salivary_gland_1DataLinearTissue_oth
170.salivary_gland_25salivary_gland_2DataLinearTissue_oth
171.skeletal_muscle_15skeletal_muscle_1DataLinearmuscle
172.skeletal_muscle_25skeletal_muscle_2DataLinearmuscle
173.spinal_cord_15spinal_cord_1DataLinearTissue_oth
174.spinal_cord_25spinal_cord_2DataLinearTissue_oth
175.spleen_15spleen_1DataLinearspleen
176.spleen_25spleen_2DataLinearspleen
177.stem_cells__HSC_15stem_cells__HSC_1DataLinearHSC
178.stem_cells__HSC_25stem_cells__HSC_2DataLinearHSC
179.stomach_15stomach_1DataLinearmuscle
180.stomach_25stomach_2DataLinearmuscle
181.testis_15testis_1DataLineartestis
182.testis_25testis_2DataLineartestis
183.thymocyte_DP_CD4+CD8+_15thymocyte_DP_CD4+CD8+_1DataLinearImmu_Cell
184.thymocyte_DP_CD4+CD8+_25thymocyte_DP_CD4+CD8+_2DataLinearImmu_Cell
185.thymocyte_SP_CD4+_15thymocyte_SP_CD4+_1DataLinearImmu_Cell
186.thymocyte_SP_CD4+_25thymocyte_SP_CD4+_2DataLinearImmu_Cell
187.thymocyte_SP_CD8+_15thymocyte_SP_CD8+_1DataLinearImmu_Cell
188.thymocyte_SP_CD8+_25thymocyte_SP_CD8+_2DataLinearImmu_Cell
189.umbilical_cord_15umbilical_cord_1DataLinearTissue_oth
190.umbilical_cord_25umbilical_cord_2DataLinearTissue_oth
191.uterus_15uterus_1DataLinearTissue_oth
192.uterus_25uterus_2DataLinearTissue_oth
Probe Set ID:1429388_at
GeneChip Array:Mouse Genome 430 2.0 Array
Species Scientific Name:Mus musculus
Annotation Date:Jun 9, 2011
Sequence Type:Consensus sequence
Sequence Source:GenBank
Transcript ID(Array Design):Mm.6047.1
Target Description:gb:AK010332.1 /DB_XREF=gi:12845696 /FEA=mRNA /CNT=30 /TID=Mm.6047.1 /TIER=Stack /STK=26 /UG=Mm.6047 /LL=71950 /UG_GENE=2410002E02Rik /UG_TITLE=RIKEN cDNA 2410002E02 gene /DEF=Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410002E02:Homeobox domain containing protein, full insert sequence.
Representative Public ID:AK010332
Archival UniGene Cluster:Mm.6047
UniGene ID:Mm.478080
Genome Version:July 2007 (Mouse Genome Sequencing Consortium and NCBI 37)
Alignments:chr6:122657611-122664651 (+) // 79.94 // q22.31 /// chrX:87127648-87128972 (-) // 39.35 // q21.31
Gene Title:Nanog homeobox
Gene Symbol:Nanog
Chromosomal Location:chr6 F2|6
Unigene Cluster Type:full length
Ensembl:ENSMUSG00000012396
Entrez Gene:71950
SwissProt:A2RS90, B7ZN41, Q0QJG6, Q5TM83, Q80Z64
EC:
OMIM:
RefSeq Protein ID:NP_082292
RefSeq Transcript ID:NM_028016
FlyBase:
AGI:
WormBase:
MGI Name:1919200
RGD Name:
SGD accession number:
Gene Ontology Biological Process:0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0001710 // mesodermal cell fate commitment // inferred from genetic interaction /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008406 // gonad development // inferred from expression pattern /// 0009790 // embryo development // inferred from mutant phenotype /// 0009790 // embryo development // inferred from expression pattern /// 0009880 // embryonic pattern specification // inferred from expression pattern /// 0010454 // negative regulation of cell fate commitment // inferred from direct assay /// 0010454 // negative regulation of cell fate commitment // inferred from genetic interaction /// 0017145 // stem cell division // inferred from direct assay /// 0019827 // stem cell maintenance // inferred from direct assay /// 0019827 // stem cell maintenance // inferred from mutant phenotype /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0032526 // response to retinoic acid // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from direct assay /// 0042664 // negative regulation of endodermal cell fate specification // traceable author statement /// 0045449 // regulation of transcription // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from direct assay /// 0048863 // stem cell differentiation // inferred from mutant phenotype
Gene Ontology Cellular Component:0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from electronic annotation
Gene Ontology Molecular Function:0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030528 // transcription regulator activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation
Pathway:
InterPro:
Trans Membrane:
QTL:
Annotation Description:This probe set was annotated using the Matching Probes based pipeline to a Entrez Gene identifier using 6 transcripts. // false // Matching Probes // A
Annotation Transcript Cluster:AB093574(11),AF507043(11),AY278951(11),AY455282(11),AY455285(11),BC083105(11)
Transcript Assignments:AB093574 // Mus musculus mRNA for homeobox transcription factor Nanog, complete cds. // gb // 11 // / AF507043 // Mus musculus embryonic stem cell specific homeobox protein mRNA, complete cds. // gb // 11 // / AY278951 // Mus musculus nanog mRNA, complete cds. // gb // 11 // / AY455282 // Mus musculus Nanog variant protein 1a (Nanog) mRNA, complete cds, alternatively spliced. // gb // 11 // / AY455285 // Mus musculus Nanog variant protein 1b (Nanog) mRNA, complete cds, alternatively spliced. // gb // 11 // / BC083105 // Mus musculus cDNA clone IMAGE:30730240. // gb // 11 // / ENSMUST00000012540 // cdna:known chromosome:NCBIM37:6:122657586:122664651:1 gene:ENSMUSG00000012396 // ensembl // 11 // / ENSMUST00000112580 // cdna:known chromosome:NCBIM37:6:122657583:122664650:1 gene:ENSMUSG00000012396 // ensembl // 11 // / ENSMUST00000112581 // cdna:known chromosome:NCBIM37:6:122657507:122664650:1 gene:ENSMUSG00000012396 // ensembl // 11
Annotation Notes:AY965066 // gb_htc // 9 // Negative Strand Matching Probes